PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn376131
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family MYB_related
Protein Properties Length: 165aa    MW: 18800.2 Da    PI: 5.0234
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn376131genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.41.6e-081652147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     +g+WT+eEd ll+++vk++G g          ++R +k+ ++rw +y
       Achn376131 16 KGPWTAEEDSLLIEYVKLHGEG----------LKRNGKSSRLRWVNY 52
                     79******************99..........344445556666665 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129412.8881157IPR017930Myb domain
Gene3DG3DSA:1.10.10.608.1E-121256IPR009057Homeodomain-like
SMARTSM007177.0E-51555IPR001005SANT/Myb domain
PfamPF002491.3E-61653IPR001005SANT/Myb domain
SuperFamilySSF466896.84E-151780IPR009057Homeodomain-like
CDDcd001671.00E-51853No hitNo description
Gene3DG3DSA:1.10.10.607.6E-85779IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 165 aa     Download sequence    Send to blast
MADNLGWGVI EEGWRKGPWT AEEDSLLIEY VKLHGEGLKR NGKSSRLRWV NYLRPDLKRG  60
QITPHEENII LELHAKWGNS ENRVPYLPQA KQDMVTLYPN NTAGEEQDFL YPLFNGYMSL  120
PEAPNHEENI LWDGLWNLDD IHGNWSMACA ANKAGLHTLA TPFC*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
SwissprotP813963e-26MYB40_ANTMA; Myb-related protein 340
TrEMBLA0A0A0LIF83e-50A0A0A0LIF8_CUCSA; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1751634
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24310.15e-39myb domain protein 305